plot.volcano

plot.volcano(assoc, *, effect='beta', p='p', fdr=0.05, label_top=10)

Effect size against evidence, for a table from :func:~falconage.associate.

The dashed line is the Benjamini-Hochberg threshold at fdr, taken from the q column when the table has one rather than recomputed. Drawing a raw p-value cut instead is the common error: across thousands of tests the two thresholds differ by orders of magnitude, and the raw one calls noise significant.