Apply a fitted calibration to a sample's linear channel values

Only channels whose fit was accepted are converted. A channel that was not calibrated is returned untouched, and the caller must not present the two as the same units.

Usage

apply_bead_calibration(exprs, channel_cols, calib, channel_names = NULL)

Arguments

exprs

a sample's expression matrix, linear units

channel_cols

named integer vector, marker to column

calib

the table from fit_bead_calibration()

channel_names

the sample's $PnN values, as read, or NULL. Where given and calib records the detector each fit came from, the fit is applied to the sample's channel of that detector.

Value

list(exprs = converted matrix, applied = character vector of markers)